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Yyyyyy x. yyyyyy
- 7 Smoketree Ct. Xxxxxx, NC xxxxxx ( (xxx-xxx-xxxx * abc@xyz.com
Pharmaceuticals Biotechnology Genomics
Qualifications Profile
Self-assured and results-driven biotechnologist with more than 8 years providing high-performance laboratory research, bioinformatics, genomics, and programing in the pharmaceutical solutions industries.
- Proven competence in analyzing Next Generation Sequencing data through Perl, Java and R programming scripts.
- Wrote and executed SOPs for CLIA laboratories ensuring compliance with CAP, and New York State regulations.
Highly detailed, analytical and methodical with critical thinking to resolve work issues even under stress.
Well-organized and resourceful with multitasking skills that optimize limited resources to achieve outstanding results.
Key Expertise
Biotechnology & Environment Research Planning & Execution
Microbiology Laboratory Operations
Laboratory Supplies Inventory Management
Research Methods & Analysis
Process/Workflow Improvement
Policies & Regulatory Compliance (i.e. OSHA, EPA, etc.)
Concurrent Project Management
Programming: Perl, R & Java
Apps: Illumina GAII, Illumina Sequencer & HiSeq
OS: Linux, & MS Windows
CLIA Assays/Sampling
TOC, Conductivity & Endotoxin Testing Methods
Bioinformatics
Genome Data Sequencing
Professional Experience
EA| Quintiles Xxxxxx, NC | Scientific Programmer May 2014 Present
Support clients in project design and bioinformatics analysis of DNA and RNA sequencing experiments.
Design, implement, and test data analysis pipelines for DNA/RNA sequencing analysis.
Facilitate information processing and analysis of Next Gen Sequencing data using new bioinformatics tools and providing more accurate descriptive and analytical documentation procedures.
Write new code and modify existing code to enhance NGS data analysis using Perl and R programming languages.
GeneDx Gaithersburg, MD
Laboratory Supervisor Apr Sep 2011
Managed and coordinated daily operations of a CLIA laboratory in completing genetic testing using targeted re-sequencing assays.
Trained laboratory technicians to operate Illumina GAII and HiSeq and prepare libraries for sequencing while ensuring compliance with standard operating procedures
Managed deviations from established protocols and visually confirmed variants detected in analysis pipelines and processed sequencing data for downstream analysis using Linux command lines.
Analyzed Sanger sequencing data used as a secondary method to confirm variants in CLIA assays
Coordinated work schedules across multi-disciplinary teams to ensure meeting deliverables and turnaround times.
Oversaw in-house and 3rd party maintenance of various laboratory equipment to minimize downtimes.
Laboratory Technologist Apr 2009 Apr 2011
Processed sequencing data for downstream analysis using Linux command lines, creating libraries for sequencing on an Illumina Sequencer following SOPs in CLIA laboratory operations.
Visually confirmed variants detected in analysis pipelines and regions of target using Genome BAM viewers.
Human Genome Sciences (contractor) Rockville, MD | Quality Control Analyst Aug Dec 2008
Performed routine environmental monitoring and water testing in compliance with cGMP.
Conducted TOC, conductivity, and endotoxin testing in a cGMP microbiology laboratory.
Education & Credentials
M.S. Biotechnology, focused in Bioinformatics, UNIVERSITY OF MARYLAND Adelphi, MD (2014)
Programming in R , UNIVERSITY OF CALIFORNIA, San Diego Extension, CA ( Fall 2014)
B.S. in Biology, WEST VIRGINIA UNIVERSITY Morgantown, WV (2007)
Published Work
Ranad Shaheen, Hanan E. Shamseldin, Catrina M. Loucks, Nadya Al-Yacoub, Natalie A. Mola, et al, Mutations in CSPP1,(2014). Encoding a Core Centrosomal Protein, Cause a Range of Ciliopathy Phenotypes in Humans, The American Journal of Human Genetics, Volume 94, Issue 1, 2 January 2014, Pages 73-79, ISSN 0002-9297 http://www.sciencedirect.com/science/article/pii/S xxx-xxx-xxxx 005259 & http://dx.doi.org/10.1016/j.ajhg.2013.11.010
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