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Yyyyyy x. yyyyyy

- 7 Smoketree Ct. Ÿ Xxxxxx, NC xxxxxx ( (xxx-xxx-xxxx * abc@xyz.com

 

Pharmaceuticals Biotechnology Genomics

Qualifications Profile

 

    Self-assured and results-driven biotechnologist with more than 8 years providing high-performance laboratory research, bioinformatics, genomics, and programing in the pharmaceutical solutions industries.

-          Proven competence in analyzing Next Generation Sequencing data through Perl, Java and R programming scripts.

-          Wrote and executed SOPs for CLIA laboratories ensuring compliance with CAP, and New York State regulations.

    Highly detailed, analytical and methodical with critical thinking to resolve work issues even under stress.

    Well-organized and resourceful with multitasking skills that optimize limited resources to achieve outstanding results.

 

Key Expertise


    Biotechnology & Environment Research Planning & Execution

    Microbiology Laboratory Operations

    Laboratory Supplies Inventory Management

    Research Methods & Analysis

    Process/Workflow Improvement

    Policies & Regulatory Compliance (i.e. OSHA, EPA, etc.)

    Concurrent Project Management

    Programming: Perl, R & Java

    Apps: Illumina GAII, Illumina Sequencer & HiSeq

    OS: Linux, & MS Windows

    CLIA Assays/Sampling

    TOC, Conductivity & Endotoxin Testing Methods

    Bioinformatics

    Genome Data Sequencing


 

Professional Experience

 

EA| Quintiles Ÿ Xxxxxx, NC | Scientific Programmer May 2014 Present

    Support clients in project design and bioinformatics analysis of DNA and RNA sequencing experiments.

    Design, implement, and test data analysis pipelines for DNA/RNA sequencing analysis.

    Facilitate information processing and analysis of Next Gen Sequencing data using new bioinformatics tools and providing more accurate descriptive and analytical documentation procedures.

    Write new code and modify existing code to enhance NGS data analysis using Perl and R programming languages.

 

GeneDx Ÿ Gaithersburg, MD

Laboratory Supervisor Apr Sep 2011

    Managed and coordinated daily operations of a CLIA laboratory in completing genetic testing using targeted re-sequencing assays.

    Trained laboratory technicians to operate Illumina GAII and HiSeq and prepare libraries for sequencing while ensuring compliance with standard operating procedures

    Managed deviations from established protocols and visually confirmed variants detected in analysis pipelines and processed sequencing data for downstream analysis using Linux command lines.

    Analyzed Sanger sequencing data used as a secondary method to confirm variants in CLIA assays

    Coordinated work schedules across multi-disciplinary teams to ensure meeting deliverables and turnaround times.

    Oversaw in-house and 3rd party maintenance of various laboratory equipment to minimize downtimes.

Laboratory Technologist Apr 2009 Apr 2011

    Processed sequencing data for downstream analysis using Linux command lines, creating libraries for sequencing on an Illumina Sequencer following SOPs in CLIA laboratory operations.

    Visually confirmed variants detected in analysis pipelines and regions of target using Genome BAM viewers.

 

Human Genome Sciences (contractor) Ÿ Rockville, MD | Quality Control Analyst Aug Dec 2008

    Performed routine environmental monitoring and water testing in compliance with cGMP.

    Conducted TOC, conductivity, and endotoxin testing in a cGMP microbiology laboratory.

 

Education & Credentials

 

    M.S. Biotechnology, focused in Bioinformatics, UNIVERSITY OF MARYLAND Ÿ Adelphi, MD (2014)

    Programming in R , UNIVERSITY OF CALIFORNIA, San Diego Extension, CA ( Fall 2014)

    B.S. in Biology, WEST VIRGINIA UNIVERSITY Ÿ Morgantown, WV (2007)

Published Work

    Ranad Shaheen, Hanan E. Shamseldin, Catrina M. Loucks, Nadya Al-Yacoub, Natalie A. Mola, et al, Mutations in CSPP1,(2014). Encoding a Core Centrosomal Protein, Cause a Range of Ciliopathy Phenotypes in Humans, The American Journal of Human Genetics, Volume 94, Issue 1, 2 January 2014, Pages 73-79, ISSN 0002-9297 http://www.sciencedirect.com/science/article/pii/S xxx-xxx-xxxx 005259 & http://dx.doi.org/10.1016/j.ajhg.2013.11.010

 

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